Yeast periodic transcription: Cell cycle and metabolic oscillation.

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The Bonferroni correction option allows to select genes by periodicity with or without correcting the p-value for hypotheses including possible multiple independent frequencies

SCEPTRANS - Saccharomyces Cerevisiae Periodic Transcription Server

Cell cycle and metabolic cycle regulated gene expression in yeast

Citation: Kudlicki A, Rowicka M, Otwinowski Z (2007), Bioinformatics 23: 1559-1561.

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The high-resolution cell cycle timing data

6 genes

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hide gene table					max/min ratio				regulated
Name	Id	Localization	Function	Description	YMC	cdc15	cdc28	alpha-38	T	C	S	P	R	X	SGD
CAF130	YGR134W	cytoplasm	transcriptional control	Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in controlling mRNA initiation	2.27	1.97	2.06	1.84
RCK2	YLR248W	cytoplasm	phosphate utilization; respiration; mitotic cell cycle and cell cycle control; meiosis; modification by phosphorylation, dephosphorylation, autophosphorylation	Protein kinase involved in the response to oxidative and osmotic stress	2.12	1.84	2.13	4.38	*
VID28	YIL017C	cytoplasm, nucleus	regulation of glycolysis and gluconeogenesis	Protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase (FBPase)	5.56	-	-	3.12	*
YBR094W	YBR094W	cytoplasm	Unclassified Proteins	P-body associated protein	3.71	2.31	2.55	1.70	*		*	*		*
YLL047W	YLL047W		Unclassified Proteins	Dubious open reading frame unlikely to encode a protein	4.19	5.36	3.63	6.35		*
YLRWTY1-3	YLRWTY1-3				3.38	-	-	-