Transcriptional Modulation Analysis--References

Refer to
1. Li X, Zhao Y, Tian B, Jamaluddin M, Mitra A, Yang J, Rowicka M, Brasier AR, Kudlicki A*, Modulation of gene expression regulated by NF-κB/RelA, J. Biol. 2014; 289: 11927-11944.
2. Li X*, Zhu M, Brasier AR, Kudlicki AS*, Inferring Genome-wide Functional Modulatory Network: a Case Study on NF-κB/RelA Transcription Factor, J. Comput. Biol. 2015; 22(4): 1-13., (* co-corresponding author
3. Tian B., Li X.#, Kalita M., Widen SG, Yang J, Bhavnani SK, Bry Dang BB, Kudlicki A, Sinha M, Kong F, Wood TG, Luxon BA and Brasier AR*, Analysis of the TGFβ-induced program in primary airway epithelial cells shows essential role of NF-κB/RelA signaling network in type II epithelial mesenchymal transition,BMC Genomics 2015, 16:529. (#co-first author)
4. Yang J, Zhao Y, Kalita M, Li X, Jamaluddin M, Tian B, Edeh CB, Wiktorowicz JE, Kudlicki A, Brasier AR*, Systematic Determination of the Activated Cyclin Dependent Kinase (CDK)-9 Interactome Identifies Novel Functions in RNA Splicing Mediated by the DDX5/17 RNA Helicases, Molecular and Cellular Proteomics, 2015 Jul 24. pii: mcp.M115.049221.
5. Li X, Zhu M, Fongang, B, Brasier AR, Kudlicki A*, A Publically Available Database for Exploring the Modulators of Multiple Transcription Factors, In Preparation



Acknowledgments
Supproted by in part by a Clinical and Translational Science Award (UL1 TR001439) from the National Center for Advancing Translational Sciences, NIH, to the Institute for Translational Sciences at the University of Texas Medical Branch, and by a training fellowship from the Keck Center Computational Cancer Biology Training Program of the Gulf Coast Consortia, CPRIT Grant No.RP140113 to XL


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The University of Texas Medical Branch--------- Kudlicki Laboratory-------- Institute for Translational Sciences-------- Department of Biochemistry and Molecular Biology



Xueling Li

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