1 sample(s) found by the keyword GSM67545.- GEO sample ID: GSM67545
- Sample_geo_accession: GSM67545
- Sample_status: Public on Aug 31 2006
- Sample_submission_date: Aug 08 2005
- Sample_last_update_date: Feb 21 2006
- Sample_type: RNA
- Sample_channel_count: 1
- Sample_source_name_ch1: upf1- cell at time point 0
- Sample_organism_ch1: Saccharomyces cerevisiae
- Sample_characteristics_ch1: Yeast strain S288C with UPF1 ORF replaced by KanMX4. Cells harvested at 0 minutes after transcription inhibition.
- Sample_molecule_ch1: total RNA
- Sample_extract_protocol_ch1: hot phenol protocol
- Sample_label_ch1: biotin
- Sample_label_protocol_ch1: cDNA was synthesized from 15ug total RNA from all samples using oligo(dT) primer. 5ul out of 12ul RnaseH-puriÞed cDNA samples were used to synthesize biotinylated cRNA.
- Sample_hyb_protocol: standard Affymetrix procedures
- Sample_scan_protocol: standard Affymetrix procedures
- Sample_description: Yeast cultures were grown to mid-log phase and harvested at 0 minutes after transcription inhibition by 10ug/ml thiolutin.
- Sample_data_processing: Robust Multiarray Average
- Sample_platform_id: GPL90
- Sample_contact_name: Michael,,Culbertson
- Sample_contact_email: mrculber@wisc.edu
- Sample_contact_phone: 608-262-5388
- Sample_contact_fax: 608-262-4570
- Sample_contact_department: Genetics
- Sample_contact_institute: University of Wisconsin
- Sample_contact_address: 1525 Linden Drive
- Sample_contact_city: Madison
- Sample_contact_state: WI
- Sample_contact_zip/postal_code: 53706
- Sample_contact_country: USA
- Sample_supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM67nnn/GSM67545/GSM67545.CEL.gz
- Sample_supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM67nnn/GSM67545/GSM67545.CHP.gz
- Sample_supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM67nnn/GSM67545/GSM67545.EXP.gz
- Sample_series_id: GSE3076
- Sample_data_row_count: 9335
- Sample_comment: Raw data provided as supplementary file
- sample_table_begin:
- sample_table_end:
- Sample_title: mut 2 rep1
ID_REF | Corrected Value | VALUE |
10000_at | 1.841 | 2.3722 |
10001_at | 7.5662 | 7.5553 |
10002_i_at | 10.2085 | 10.2004 |
10003_f_at | 10.9752 | 10.986 |
10004_at | 2.5068 | 2.9356 |
10005_at | 6.671 | 6.7747 |
10006_at | 5.9555 | 6.1375 |
10007_at | 8.0157 | 8.1844 |
10008_at | 3.9681 | 4.2998 |
10009_at | 5.5161 | 5.7252 |
View Full Table
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