1 sample(s) found by the keyword GSM254772.


  1. GEO sample ID: GSM254772
    • Sample_geo_accession: GSM254772
    • Sample_status: Public on Jan 09 2008
    • Sample_submission_date: Jan 04 2008
    • Sample_last_update_date: Jan 08 2008
    • Sample_type: RNA
    • Sample_channel_count: 1
    • Sample_source_name_ch1: S. cerevisiae Strain S288C cells treated with sampangine (SMP)
    • Sample_organism_ch1: Saccharomyces cerevisiae
    • Sample_characteristics_ch1: S. cerevisiae S288C cells at OD 0.2 were treated with sampangine (SMP) at IC50 concentration (1.17 ug/ml), allowed to grow to OD 0.5, then harvested and frozen. Three biological replicate samples were generated.
    • Sample_molecule_ch1: total RNA
    • Sample_extract_protocol_ch1: Qiagen RNeasy Midi-kit
    • Sample_label_ch1: Biotin
    • Sample_label_protocol_ch1: Affymetrix One Cycle Target Labeling kit
    • Sample_hyb_protocol: Affymetrix GenChip Hybridization protocol, and GeneChip Fluidics Station 450 default protocol
    • Sample_scan_protocol: Affymetrix GeneChip Scanner 3000 default parameters
    • Sample_description: S. cerevisiae SMP_Treated_B
    • Sample_data_processing: Image analysis, scaling (TGT
    • Sample_platform_id: GPL90
    • Sample_contact_name: Ameeta,,Agarwal
    • Sample_contact_email: aagarwal@olemiss.edu
    • Sample_contact_phone: 662-915-1218
    • Sample_contact_fax: 662-915-7062
    • Sample_contact_department: National Center for Natural Products Research
    • Sample_contact_institute: University of Mississippi
    • Sample_contact_address: NCNPR, Room 2049
    • Sample_contact_city: University
    • Sample_contact_state: MS
    • Sample_contact_zip/postal_code: 38677
    • Sample_contact_country: USA
    • Sample_supplementary_file: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/samples/GSM254nnn/GSM254772/GSM254772.CEL.gz
    • Sample_series_id: GSE10073
    • Sample_series_id: GSE10104
    • Sample_data_row_count: 9335
    • Sample_comment: Raw data provided as supplementary file
    • sample_table_begin:
    • sample_table_end:
    • Sample_title: S. cerevisiae SMP_Treated_C
    ID_REF Corrected Value VALUE DETECTION_CALL
    AFFX-MurIL2_at 0.2 1.2 A
    AFFX-MurIL10_at 1.8 1.3 A
    AFFX-MurIL4_at 10.7 1.4 A
    AFFX-MurFAS_at 17.9 2 A
    AFFX-BioB-5_at 243.5 101.9 P
    AFFX-BioB-M_at 264.1 137.2 P
    AFFX-BioB-3_at 258.4 138.6 P
    AFFX-BioC-5_at 475.7 355.4 P
    AFFX-BioC-3_at 520.2 392.9 P
    AFFX-BioDn-5_at 852.7 730 P
    View Full Table






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